Evaluation of the parameter k

Evaluation of the parameter k

Usage

eval_k(mND = NULL, X0 = NULL, G = NULL, top = 200)

Arguments

mND

list; list of mND score obtained for different k values, list components should be named as the k values used

X0

matrix; initial score matrix X0, in which each column (layer) represents a score vector over all vertices of G

G

graph; gene x gene undirected interaction graph

top

numeric; number of genes to be considered at the top of the list of genes ranked by mND

Value

list with calculation of w at varying k and plot with results.