Create a gseaResult instance from Ulisse GSEA result

Create a gseaResult instance from Ulisse GSEA result

Usage

gsea2enrich(
  gsea_res = NULL,
  rl = NULL,
  gsl = NULL,
  min_size = 5,
  max_size = 500,
  decreasing = NULL
)

Arguments

gsea_res

output of function gsea()

rl

the input used to obtain gsea_res; numeric matrix of genes-by-ranking criteria; each column contains numeric values; rownames are mandatory;

gsl

named list of gene sets used to obtain gsea_res

min_size

minimum gene set size

max_size

maximum gene set size

decreasing

TRUE/FALSE vector that specifies whether to order each column of rl decreasingly or not; must be of length equal to ncol(rl). If NULL, all #' @export