Transcriptional Complexity and Entropy
Usage
transcr_compl(
scMuffinList = NULL,
min_counts = 5,
min_cells = 10,
min_genes = 500
)
Arguments
- scMuffinList
scMuffinList object
- min_counts
minimum number of counts
- min_cells
minimum number of cells in which a gene must have at least min_counts counts
- min_genes
minimum number of genes that a cell must express with at least min_counts counts
Value
scMuffinList with transcr_compl element a list with summary (full is empty):
tot_counts, total number of transcripts;
n_genes, total number of expressed genes;
C, transcriptional complexity;
H, transcriptional entropy;