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Plot an heatmap of the CNV.

Usage

plot_profile_CNV(
  scMuffinList = NULL,
  cluster = 0,
  z.score = TRUE,
  file = NULL,
  width = 300,
  height = 90,
  units = "mm",
  res = 300,
  cex.points = 0.7,
  cex.lab = 0.7,
  cex.axis = 0.7,
  cex.main = 0.7
)

Arguments

scMuffinList

scMuffinList object

cluster

cluster to be plotted

z.score

whether to plot cluster median z-scores of CNV profile (TRUE) or cluster median CNV profile (FALSE).

file

File name to save the figure as png file

width

image width

height

image height

units

image units

res

image resolution

cex.points

cex of points

cex.lab

cex of labs

cex.axis

cex of axis

cex.main

cex of main

Details

CNV Profile of every cluster