Skip to contents

Calculate permutations

Usage

calc_gs_perm(rll = NULL, perm = NULL, gs = NULL, fract_min = 0.2)

Arguments

rll

numeric matrix of genes-by-ranking criteria; each column contains numeric values; rownames are mandatory

perm

vector of permuted names

gs

gene set

fract_min

only cluster of size less or equal to this fraction of cell with not null feature values will be analysed